TnT

TnT is a R package that wraps the TnT javascript libraries to provide track-based visulizations from R. It is useful for displaying genomic features as a simple genome browser, particularly when working with relevant Bioconductor packages.

To install the stable version from biocondcutor, use

source("https://bioconductor.org/biocLite.R")
biocLite("TnT")

Or alternatively, install the latest version from github with

devtools::install_github("Marlin-Na/TnT")

To get started, checkout:

• The package vignette Introduction to TnT
• Examples of different track types.

You can also find the package on Bioconductor.

GSoC 2017

This R package was a Google Summer of Code project in 2017, kindly mentored by Toby Dylan Hocking and Miguel Pignatelli, under the organization of R project for statistical computing.

Please see:

• The project link
• Wiki of the project idea
• My blog post as a summary of the project.